loadData: Loads saved data

In ChristofferFlensburg/superFreq: Calls and tracks CNAs, SNVs and clones over multiple cancer exomes.

Loads saved data

Description

This function returns the data produced from an analyse() run.

Usage

loadData(Rdirectory, setVariantLoss = F, correctReferenceBias = T)

Arguments

Rdirectory	A character string pointing to the Rdirectory of the analysis.
setVariantLoss	If the average variant loss should be calculated. This measures reference bias of the variant frequencies, is set globally and is used by many other functions.

Examples

## Not run: 
not run
data = loadData('~/myAnalysis/R', setVariantLoss=T)
cnvs = data$clusters
plotCR(cnvs[['aSample']]$clusters)

## End(Not run)

ChristofferFlensburg/superFreq documentation built on Nov. 15, 2023, 6:15 a.m.