annotation_table: Table for the annotation of Barcode
In EmanuelSoda/ScreenR: Package to Perform High Throughput Biological Screening
annotation_table R Documentation
Table for the annotation of Barcode
Description
Table for the annotation of Barcode
Usage
data(annotation_table)
Format
A data frame with 5320 rows and 2 columns obtained from a
loss-of-function genetic screening. This table is used to
store information about the shRNAs:
- Gene
It Contains the gene name
- Barcode
It contains an ID that identify each barcode
(it is an unique identifier for an shRNA). I
t can be use to merge the annotation table with t
he count table
- Gene_ID
It Contains a unique Gene ID
- Sequence
It contains the cDNA sequence of the shRNA associated to
the barcode
- Library
It contains the library from which the shRNA come from.
In this case is a pooled from
https://cellecta.com/cellecta
EmanuelSoda/ScreenR documentation built on Sept. 29, 2023, 12:33 a.m.
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| annotation_table | R Documentation |
Table for the annotation of Barcode
Description
Table for the annotation of Barcode
Usage
data(annotation_table)
Format
A data frame with 5320 rows and 2 columns obtained from a loss-of-function genetic screening. This table is used to store information about the shRNAs:
- Gene
It Contains the gene name
- Barcode
It contains an ID that identify each barcode (it is an unique identifier for an shRNA). I t can be use to merge the annotation table with t he count table
- Gene_ID
It Contains a unique Gene ID
- Sequence
It contains the cDNA sequence of the shRNA associated to the barcode
- Library
It contains the library from which the shRNA come from. In this case is a pooled from https://cellecta.com/cellecta
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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