barcode_lost: Count number of barcode lost
In EmanuelSoda/ScreenR: Package to Perform High Throughput Biological Screening
barcode_lost R Documentation
Count number of barcode lost
Description
This function counts the number of barcodes lost during the
sequencing. A barcode is lost if its associated shRNA has zero
mapped read in a sample.
Usage
barcode_lost(screenR_Object)
Arguments
screenR_Object
The ScreenR object obtained using the
create_screenr_object
Value
Return a tibble containing the number of barcode lost for each
sample
Examples
object <- get0("object", envir = asNamespace("ScreenR"))
# In order to count the number of barcodes lost just the ScreenR object is
# needed
head(barcode_lost(object))
EmanuelSoda/ScreenR documentation built on Sept. 29, 2023, 12:33 a.m.
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| barcode_lost | R Documentation |
Count number of barcode lost
Description
This function counts the number of barcodes lost during the sequencing. A barcode is lost if its associated shRNA has zero mapped read in a sample.
Usage
barcode_lost(screenR_Object)
Arguments
screenR_Object |
The ScreenR object obtained using the
|
Value
Return a tibble containing the number of barcode lost for each sample
Examples
object <- get0("object", envir = asNamespace("ScreenR"))
# In order to count the number of barcodes lost just the ScreenR object is
# needed
head(barcode_lost(object))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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