count_mapped_reads: Count the number of mapped read
In EmanuelSoda/ScreenR: Package to Perform High Throughput Biological Screening
View source: R/count_mapped_reads.R
count_mapped_reads R Documentation
Count the number of mapped read
Description
This function counts the number of reads for each barcode
in each sample. It is a quality control function (QC) to see if
the biological protocol went as planned.
If a sample has very low mapped compared to the other means
that is has a lower quality.
Usage
count_mapped_reads(screenR_Object)
Arguments
screenR_Object
The ScreenR object obtained using the
create_screenr_object
Value
Return a tibble containing the number of mapped read for sample
Examples
object <- get0("object", envir = asNamespace("ScreenR"))
head(count_mapped_reads(object))
EmanuelSoda/ScreenR documentation built on Sept. 29, 2023, 12:33 a.m.
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View source: R/count_mapped_reads.R
| count_mapped_reads | R Documentation |
Count the number of mapped read
Description
This function counts the number of reads for each barcode in each sample. It is a quality control function (QC) to see if the biological protocol went as planned. If a sample has very low mapped compared to the other means that is has a lower quality.
Usage
count_mapped_reads(screenR_Object)
Arguments
screenR_Object |
The ScreenR object obtained using the
|
Value
Return a tibble containing the number of mapped read for sample
Examples
object <- get0("object", envir = asNamespace("ScreenR"))
head(count_mapped_reads(object))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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