normalize_data: Normalize data

In EmanuelSoda/ScreenR: Package to Perform High Throughput Biological Screening

Normalize data

Description

This function perform a normalization on the data considering the fact that each shRNA has a defined length so this will not influence the data. Basically is computed the sum for each row and then multiply by 1e6. At the end the data obtained will be Count Per Million.

Usage

normalize_data(screenR_Object)

Arguments

screenR_Object

The ScreenR object obtained using the create_screenr_object

Value

Return the ScreenR object with the normalize data

Examples

object <- get0("object", envir = asNamespace("ScreenR"))
object <- normalize_data(object)

slot(object, "normalized_count_table")

EmanuelSoda/ScreenR documentation built on Sept. 29, 2023, 12:33 a.m.