as_phyloseq: Converts the denoise artifact to a phyloseq object.
In Gibbons-Lab/mbtools: Provides helper functions for microbiome preprocessing and analysis
View source: R/workflow_dada2.R
as_phyloseq R Documentation
Converts the denoise artifact to a phyloseq object.
Description
Converts the denoise artifact to a phyloseq object.
Usage
as_phyloseq(object, metadata = NULL)
Arguments
object
The artifact returned by denoise.
metadata
Sample metadata to add to the phyloseq object. Must have
rownames that match the sample names.
Value
A phyloseq object with additional annotations.
Gibbons-Lab/mbtools documentation built on Jan. 28, 2024, 11:08 a.m.
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View source: R/workflow_dada2.R
| as_phyloseq | R Documentation |
Converts the denoise artifact to a phyloseq object.
Description
Converts the denoise artifact to a phyloseq object.
Usage
as_phyloseq(object, metadata = NULL)
Arguments
object |
The artifact returned by |
metadata |
Sample metadata to add to the phyloseq object. Must have rownames that match the sample names. |
Value
A phyloseq object with additional annotations.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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