mothur_to_dada: Converts taxa annotations from mothur format to dada2 format.

View source: R/convert.R

mothur_to_dadaR Documentation

Converts taxa annotations from mothur format to dada2 format.

Description

Converts taxa annotations from mothur format to dada2 format.

Usage

mothur_to_dada(seq_file, taxa_file, out = "taxonomy.fa.gz")

Arguments

seq_file

A fasta file containing the (cluster) sequences.

taxa_file

A tab-separated file with IDs on the first column and taxonomy in the second column.

out

Filename for the compressed output file.

Value

Nothing.

Examples

NULL


Gibbons-Lab/mbtools documentation built on Jan. 28, 2024, 11:08 a.m.