filter_reference: Filter a set of reference sequences from the data set.seed

In Gibbons-Lab/mbtools: Provides helper functions for microbiome preprocessing and analysis

Filter a set of reference sequences from the data set.seed

Description

This will also return a data.table containing the counts of reference sequences for each sample.

Usage

filter_reference(object, ...)

Arguments

object	An experiment data table as returned by find_read_files or a worflow object.
...	A configuration as returned by config_reference.

Value

A list with the processed files and removal counts for each sample.

Gibbons-Lab/mbtools documentation built on Jan. 28, 2024, 11:08 a.m.