normalize: Normalize a set of read counts across samples
In Gibbons-Lab/mbtools: Provides helper functions for microbiome preprocessing and analysis
normalize R Documentation
Normalize a set of read counts across samples
Description
Uses DESeq2's size factor estimation.
Usage
normalize(counts, method = "poscounts")
Arguments
counts
A count matrix with samples as rows or mbquant object.
method
The method to use. Defaults to "poscounts".
Value
An object containing normlized read counts.
Examples
NULL
Gibbons-Lab/mbtools documentation built on Jan. 28, 2024, 11:08 a.m.
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| normalize | R Documentation |
Normalize a set of read counts across samples
Description
Uses DESeq2's size factor estimation.
Usage
normalize(counts, method = "poscounts")
Arguments
counts |
A count matrix with samples as rows or mbquant object. |
method |
The method to use. Defaults to "poscounts". |
Value
An object containing normlized read counts.
Examples
NULL
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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