discard_0_counts: Discard empty counts
In HCGB-IGTP/HCGB.IGTP.DAnalysis: Useful in-house functions for multiple analysis
discard_0_counts R Documentation
Discard empty counts
Description
This functions prepares countsfile for DESeq discarding rows with
many 0 for all samples. It uses the given cutoff, to discard rows containing
greater than a cutoff in percentage of 0's. Default cutoff value is 0.9
Usage
discard_0_counts(countsF, cutoff = 0.9)
Arguments
countsF
Count file for DESeq
cutoff
Cutoff for discarding rows
HCGB-IGTP/HCGB.IGTP.DAnalysis documentation built on April 13, 2025, 12:03 a.m.
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| discard_0_counts | R Documentation |
Discard empty counts
Description
This functions prepares countsfile for DESeq discarding rows with many 0 for all samples. It uses the given cutoff, to discard rows containing greater than a cutoff in percentage of 0's. Default cutoff value is 0.9
Usage
discard_0_counts(countsF, cutoff = 0.9)
Arguments
countsF |
Count file for DESeq |
cutoff |
Cutoff for discarding rows |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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