get_probes_limma: Create limma analysis for each probe
In HCGB-IGTP/HCGB.IGTP.DAnalysis: Useful in-house functions for multiple analysis
View source: R/EPIC_functions.R
get_probes_limma R Documentation
Create limma analysis for each probe
Description
This functions creates a simplified version of limma analysis for each probe
Usage
get_probes_limma(
values_df,
design_given,
contrasts.matrix_given,
pval_sign = 0.05,
thr = 0.26
)
Arguments
values_df
Values to test
design_given
Statistical design
contrasts.matrix_given
Contrasts to test
pval_sign
Cufoff for pvalue adjusted
thr
Threshold for LFC
HCGB-IGTP/HCGB.IGTP.DAnalysis documentation built on April 13, 2025, 12:03 a.m.
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View source: R/EPIC_functions.R
| get_probes_limma | R Documentation |
Create limma analysis for each probe
Description
This functions creates a simplified version of limma analysis for each probe
Usage
get_probes_limma(
values_df,
design_given,
contrasts.matrix_given,
pval_sign = 0.05,
thr = 0.26
)
Arguments
values_df |
Values to test |
design_given |
Statistical design |
contrasts.matrix_given |
Contrasts to test |
pval_sign |
Cufoff for pvalue adjusted |
thr |
Threshold for LFC |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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