filter_signficant_DESEQ: Filter significant hits from DESEQ2 analysis
In HCGB-IGTP/HCGB.IGTP.DAnalysis: Useful in-house functions for multiple analysis
View source: R/DESeq2_functions.R
filter_signficant_DESEQ R Documentation
Filter significant hits from DESEQ2 analysis
Description
When running DESeq2 you usually required significant hits.
Usage
filter_signficant_DESEQ(dataF, sign_value = 0.05, LFC = 0.26)
Arguments
dataF
Dataframe with either normalized values and DESEQ2 values or only DESEQ2.
sign_value
Pvalue adjusted cutoff: Default=0.05
LFC
Log Fold Change cutoff: Default: 0.26
HCGB-IGTP/HCGB.IGTP.DAnalysis documentation built on April 13, 2025, 12:03 a.m.
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View source: R/DESeq2_functions.R
| filter_signficant_DESEQ | R Documentation |
Filter significant hits from DESEQ2 analysis
Description
When running DESeq2 you usually required significant hits.
Usage
filter_signficant_DESEQ(dataF, sign_value = 0.05, LFC = 0.26)
Arguments
dataF |
Dataframe with either normalized values and DESEQ2 values or only DESEQ2. |
sign_value |
Pvalue adjusted cutoff: Default=0.05 |
LFC |
Log Fold Change cutoff: Default: 0.26 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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