pruneChromosomes: Prune chromosomes
In KasperThystrup/circulaR: Characterization of circRNAs from Total RNA-seq data
Description
Usage
Arguments
Value
Examples
Description
Define which chromosomes to use from genomic annotation object, default 'NULL' does not exclude any chromosomes
Usage
1
pruneChromosomes(db, chromosomes = NULL)
Arguments
db
An object containing a Seqinfo class, for chromosomal values.
chromosomes
A vector of chromosomes to keep, must be 'integer', 'character' or 'NULL' (default). Alterantive provide the value "standard" No chromosomes are removed if set to 'NULL'.
Value
Same as input, but with certin chromosomes removed.
Examples
1
pruneChromosomes(db, chromosomes = c(1:22, x, y)
KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.
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Description Usage Arguments Value Examples
Description
Define which chromosomes to use from genomic annotation object, default 'NULL' does not exclude any chromosomes
Usage
1 | pruneChromosomes(db, chromosomes = NULL)
|
Arguments
db |
An object containing a Seqinfo class, for chromosomal values. |
chromosomes |
A vector of chromosomes to keep, must be 'integer', 'character' or 'NULL' (default). Alterantive provide the value "standard" No chromosomes are removed if set to 'NULL'. |
Value
Same as input, but with certin chromosomes removed.
Examples
1 | pruneChromosomes(db, chromosomes = c(1:22, x, y)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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