overlapInputs: overlapInputs
In MPIIComputationalEpigenetics/MAGAR: MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data
overlapInputs R Documentation
overlapInputs
Description
Overlaps the input annotations
Usage
overlapInputs(meth.qtl.list, type)
Arguments
meth.qtl.list
A list of MethQTLInput-class or MethQTLResult-class objects to be overlapped
type
The type of annotation to be overlapped. Needs to be 'SNP', 'CpG' or 'cor.block'
Value
A data frame containing the annotations of the unique input values.
Author(s)
Michael Scherer
Examples
meth.qtl.1 <- loadMethQTLInput(system.file("extdata","reduced_methQTL",package="MAGAR"))
meth.qtl.2 <- meth.qtl.1
res <- overlapInputs(list(A=meth.qtl.1,B=meth.qtl.2),type="SNP")
MPIIComputationalEpigenetics/MAGAR documentation built on April 29, 2024, 1:09 a.m.
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| overlapInputs | R Documentation |
overlapInputs
Description
Overlaps the input annotations
Usage
overlapInputs(meth.qtl.list, type)
Arguments
meth.qtl.list |
A list of |
type |
The type of annotation to be overlapped. Needs to be |
Value
A data frame containing the annotations of the unique input values.
Author(s)
Michael Scherer
Examples
meth.qtl.1 <- loadMethQTLInput(system.file("extdata","reduced_methQTL",package="MAGAR"))
meth.qtl.2 <- meth.qtl.1
res <- overlapInputs(list(A=meth.qtl.1,B=meth.qtl.2),type="SNP")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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