qtlUpSetPlotTagCpGs: qtlUpSetPlotTagCpGs

In MPIIComputationalEpigenetics/MAGAR: MAGAR: R-package to compute methylation Quantitative Trait Loci (methQTL) from DNA methylation and genotyping data

qtlUpSetPlotTagCpGs

Description

This function overlaps the tagCpGs for a list of methQTL results

Usage

qtlUpSetPlotTagCpGs(meth.qtl.res.list, ...)

Arguments

meth.qtl.res.list	A list of MethQTLResult-class objects, for which correlation blocks are to be overlapped
...	Further argument passed to upset

Details

This function draws an UpSetPlot for the overlaps directly from to the open graphics device

Value

None

Author(s)

Michael Scherer

Examples

meth.qtl.res.1 <- loadMethQTLResult(system.file("extdata","MethQTLResult_chr18",package="MAGAR"))
meth.qtl.res.2 <- meth.qtl.res.1
qtlUpSetPlotTagCpGs(list(A=meth.qtl.res.1,B=meth.qtl.res.2))

MPIIComputationalEpigenetics/MAGAR documentation built on April 29, 2024, 1:09 a.m.