createBiopaxnew: Create a new Biopax model containing all database...

Description Usage Arguments Value

View source: R/pwOmics_helper_functions.R

Description

This function creates a new biopax model depending on which pathway databases are chosen for analysis.

Usage

1
createBiopaxnew(intIDs, pwdatabases)

Arguments

intIDs

output list of genintIDs function.

pwdatabases

vector indicating with which pathway database the pathways should be determined; possible choices are "biocarta", "kegg", "nci", "reactome".

Value

biopax object generated from the specified pathway databases.


MarenS2/pwOmics_maren documentation built on May 6, 2019, 3:27 p.m.