identTFTGsinPWs: Prepare OmicsData object for pathway information.
In MarenS2/pwOmics_maren: Pathway-based data integration of omics data
Description
Usage
Arguments
Value
View source: R/pwOmics_helper_functions.R
Description
This function identifies the TFs in the pathway genes and determines their
target genes on basis of the given (chosen) TF-target database(s).
Usage
1
identTFTGsinPWs(data_omics, temp_genelist)
Arguments
data_omics
OmicsData object.
temp_genelist
dataframe of unique gene IDs in PWs.
Value
list with first element being a genelist of the pathways and second
being a target gene list of TFs.
MarenS2/pwOmics_maren documentation built on May 6, 2019, 3:27 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
View source: R/pwOmics_helper_functions.R
Description
This function identifies the TFs in the pathway genes and determines their target genes on basis of the given (chosen) TF-target database(s).
Usage
1 | identTFTGsinPWs(data_omics, temp_genelist)
|
Arguments
data_omics |
OmicsData object. |
temp_genelist |
dataframe of unique gene IDs in PWs. |
Value
list with first element being a genelist of the pathways and second being a target gene list of TFs.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.