identPWsofTFs: Identification of pathways containing the transcription...
In MarenS2/pwOmics_maren: Pathway-based data integration of omics data
Description
Usage
Arguments
Value
View source: R/pwOmics_helper_functions.R
Description
Identification of pathways containing the transcription factors identified in
upstream analysis
Usage
1
identPWsofTFs(genelists, tps_TFs)
Arguments
genelists
data.table as read/loaded by loadGenelist function.
tps_TFs
data.table of upstream transcription factors
as returned from identTFs function.
Value
list with first element being a pathway list and second being a
pathway dataframe of pathways including the TFs of the specified timepoint.
MarenS2/pwOmics_maren documentation built on May 6, 2019, 3:27 p.m.
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Description Usage Arguments Value
View source: R/pwOmics_helper_functions.R
Description
Identification of pathways containing the transcription factors identified in upstream analysis
Usage
1 | identPWsofTFs(genelists, tps_TFs)
|
Arguments
genelists |
data.table as read/loaded by loadGenelist function. |
tps_TFs |
data.table of upstream transcription factors as returned from identTFs function. |
Value
list with first element being a pathway list and second being a pathway dataframe of pathways including the TFs of the specified timepoint.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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