loadPWs: Load pathway database information.
In MarenS2/pwOmics_maren: Pathway-based data integration of omics data
Description
Usage
Arguments
Value
View source: R/pwOmics_helper_functions.R
Description
This function loads the pathway information from pathway databases.
Needed in the identifyPWs function.
Usage
1
loadPWs(pwdatabases, biopax_level)
Arguments
pwdatabases
vector indicating with which pathway database the
pathways should be determined; possible choices
are "biocarta", "kegg", "nci", "reactome".
biopax_level
integer indicating biopax level of pathway database
information to be retrieved.
Value
list of biopax model corresponding to specified pathway databases.
MarenS2/pwOmics_maren documentation built on May 6, 2019, 3:27 p.m.
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Description Usage Arguments Value
View source: R/pwOmics_helper_functions.R
Description
This function loads the pathway information from pathway databases. Needed in the identifyPWs function.
Usage
1 | loadPWs(pwdatabases, biopax_level)
|
Arguments
pwdatabases |
vector indicating with which pathway database the pathways should be determined; possible choices are "biocarta", "kegg", "nci", "reactome". |
biopax_level |
integer indicating biopax level of pathway database information to be retrieved. |
Value
list of biopax model corresponding to specified pathway databases.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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