API for MattPM/scglmmr
Sample-level Single-cell Generalized Linear Multilevel Models in R
| Global functions | |
|---|---|
| %>% | Man page |
| .onAttach | Source code |
| AggregateCellMetadata | Man page Source code |
| AverageSampleModuleZscore | Man page Source code |
| BulkDesignMatrix | Man page |
| CombineResults | Man page Source code |
| EnrichmentJaccard | Man page |
| ExtractResult | Man page Source code |
| FgseaList | Man page Source code |
| FitDream | Man page Source code |
| FitLmer | Man page Source code |
| FitLmerContrast | Man page Source code |
| GSEABarPlot | Man page |
| GSEABubblePlot | Man page Source code |
| GetContrastResults | Man page Source code |
| GetContrastResultsRaw | Man page Source code |
| GetGeneMatrix | Man page Source code |
| GetLeadingEdgeFull | Man page Source code |
| GetLeadingEdgeGenes | Man page Source code |
| GetRankResults | Man page Source code |
| GetRankResultsRaw | Man page Source code |
| GetTidySummary | Man page Source code |
| HeatmapDiag | Man page Source code |
| LeadEdgeSampleHeatmap | Man page Source code |
| LeadEdgeTidySampleExprs | Man page Source code |
| LeadingEdgeIndexed | Man page Source code |
| Normalize | Man page |
| NormalizePseudobulk | Man page |
| PlotFgsea | Man page Source code |
| PlotGeneDistCohort | Man page Source code |
| PlotHypergeometric | Man page Source code |
| PseudobulkList | Man page Source code |
| RbindGseaResultList | Man page Source code |
| RunFgseaOnRankList | Man page Source code |
| RunHypergeometricTest | Man page Source code |
| RunVoomLimma | Man page Source code |
| RunVoomLimma_covar | Man page Source code |
| SCMixedPoisson | Man page Source code |
| SLImatrix | Source code |
| Signaturescores | Source code |
| SubjectCelltypeTable | Man page Source code |
| TidySampleData | Man page Source code |
| WeightedCellModuleScore | Man page Source code |
| calc_avg_module_zscore | Man page Source code |
| p.adjust.cormat | Source code |
| scglmmr_message | Source code |
