GetLeadingEdgeFull: GetLeadingEdgeFull Get a tidy dataframe of ALL Leading Edge...

In MattPM/scglmmr: Sample-level Single-cell Generalized Linear Multilevel Models in R

GetLeadingEdgeFull Get a tidy dataframe of ALL Leading Edge Genes from gene set enrichment for all cell types

Description

GetLeadingEdgeFull Get a tidy dataframe of ALL Leading Edge Genes from gene set enrichment for all cell types

Usage

GetLeadingEdgeFull(gsea.list, padj.filter = NULL, NES.filter, p.filter = NULL)

Arguments

gsea.list	results returned by RunFgseaOnRankList
padj.filter	filter reslts
NES.filter	filter results
p.filter	raw p value filter – padj.filter must not be specified

Value

a list

Examples

## Not run: 
lefull = scglmmr::GetLeadingEdgeFull(gsea.list = gsea1, padj.filter = 0.1,NES.filter = -Inf)

## End(Not run)

MattPM/scglmmr documentation built on April 26, 2024, 12:55 a.m.