GetLeadingEdgeGenes: GetLeadingEdgeGenes get the leading edge genes from a single...

In MattPM/scglmmr: Sample-level Single-cell Generalized Linear Multilevel Models in R

GetLeadingEdgeGenes get the leading edge genes from a single cell type / module combination

Description

GetLeadingEdgeGenes get the leading edge genes from a single cell type / module combination

Usage

GetLeadingEdgeGenes(gsea.result.list, celltype.index, module.name)

Arguments

gsea.result.list	results from RunFgseaOnRank
celltype.index	celltype number of result list
module.name	name of module

Value

a vector of genes

Examples

## Not run: 
le_mono = GetLeadingEdgeGenes(gsea.result.list = gsea1, celltype.index = 4, module.name = 'my_modulename_from_gsearesults')

## End(Not run)

MattPM/scglmmr documentation built on April 26, 2024, 12:55 a.m.