PlotFgsea: PlotFgsea identical to GSEABubblePlot, returns plot for...

In MattPM/scglmmr: Sample-level Single-cell Generalized Linear Multilevel Models in R

PlotFgsea identical to GSEABubblePlot, returns plot for manual adjustment or saving and also clusters the map.

Description

PlotFgsea identical to GSEABubblePlot, returns plot for manual adjustment or saving and also clusters the map.

Usage

PlotFgsea(
  gsea_result_list,
  NES_filter = -Inf,
  padj_filter = 0.1,
  p.threshold = NULL
)

Arguments

rbind_gsea_result_dataframe

dataframe returned by RbindGseaResultList

Value

ggplot object

Examples

## Not run: 
p = PlotFgsea(gsea_result_list = g1, padj_filter = 0.1)

## End(Not run)

MattPM/scglmmr documentation built on April 26, 2024, 12:55 a.m.