PAGE_DT_method: PAGE_DT_method

In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox

PAGE_DT_method

Description

PAGE data.table method

Usage

PAGE_DT_method(
  sign_matrix,
  expr_values,
  min_overlap_genes = 5,
  logbase = 2,
  reverse_log_scale = TRUE,
  output_enrichment = c("original", "zscore"),
  p_value = FALSE,
  include_depletion = FALSE,
  n_times = 1000,
  max_block = 2e+07,
  verbose = TRUE
)

RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.