combineCellProximityGenes_per_interaction: combineCellProximityGenes_per_interaction
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
combineCellProximityGenes_per_interaction R Documentation
combineCellProximityGenes_per_interaction
Description
Combine CPG scores per interaction
Usage
combineCellProximityGenes_per_interaction(
cpgObject,
sel_int,
selected_genes = NULL,
specific_genes_1 = NULL,
specific_genes_2 = NULL,
min_cells = 5,
min_int_cells = 3,
min_fdr = 0.05,
min_spat_diff = 0,
min_log2_fc = 0.5
)
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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| combineCellProximityGenes_per_interaction | R Documentation |
combineCellProximityGenes_per_interaction
Description
Combine CPG scores per interaction
Usage
combineCellProximityGenes_per_interaction(
cpgObject,
sel_int,
selected_genes = NULL,
specific_genes_1 = NULL,
specific_genes_2 = NULL,
min_cells = 5,
min_int_cells = 3,
min_fdr = 0.05,
min_spat_diff = 0,
min_log2_fc = 0.5
)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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