create_average_DT: create_average_DT
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
View source: R/auxiliary_giotto.R
create_average_DT R Documentation
create_average_DT
Description
calculates average gene expression for a cell metadata factor (e.g. cluster)
Usage
create_average_DT(
gobject,
meta_data_name,
expression_values = c("normalized", "scaled", "custom")
)
Arguments
gobject
giotto object
meta_data_name
name of metadata column to use
expression_values
which expression values to use
Value
data.table with average gene epression values for each factor
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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View source: R/auxiliary_giotto.R
| create_average_DT | R Documentation |
create_average_DT
Description
calculates average gene expression for a cell metadata factor (e.g. cluster)
Usage
create_average_DT(
gobject,
meta_data_name,
expression_values = c("normalized", "scaled", "custom")
)
Arguments
gobject |
giotto object |
meta_data_name |
name of metadata column to use |
expression_values |
which expression values to use |
Value
data.table with average gene epression values for each factor
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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