create_average_DT: create_average_DT

View source: R/auxiliary_giotto.R

create_average_DTR Documentation

create_average_DT

Description

calculates average gene expression for a cell metadata factor (e.g. cluster)

Usage

create_average_DT(
  gobject,
  meta_data_name,
  expression_values = c("normalized", "scaled", "custom")
)

Arguments

gobject

giotto object

meta_data_name

name of metadata column to use

expression_values

which expression values to use

Value

data.table with average gene epression values for each factor


RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.