create_jackstrawplot: create_jackstrawplot
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
View source: R/dimension_reduction.R
create_jackstrawplot R Documentation
create_jackstrawplot
Description
create jackstrawplot with ggplot
Usage
create_jackstrawplot(
jackstraw_data,
ncp = 20,
ylim = c(0, 1),
threshold = 0.01
)
Arguments
jackstraw_data
result from jackstraw function
ncp
number of principal components to calculate
ylim
y-axis limits on jackstraw plot
threshold
p.value threshold to call a PC significant
Value
ggplot
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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View source: R/dimension_reduction.R
| create_jackstrawplot | R Documentation |
create_jackstrawplot
Description
create jackstrawplot with ggplot
Usage
create_jackstrawplot(
jackstraw_data,
ncp = 20,
ylim = c(0, 1),
threshold = 0.01
)
Arguments
jackstraw_data |
result from jackstraw function |
ncp |
number of principal components to calculate |
ylim |
y-axis limits on jackstraw plot |
threshold |
p.value threshold to call a PC significant |
Value
ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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