dimPlot_2D_plotly | R Documentation |
Visualize cells at their 2D dimension reduction coordinates with plotly
dimPlot_2D_plotly(
gobject,
dim_reduction_to_use = "umap",
dim_reduction_name = "umap",
dim1_to_use = 1,
dim2_to_use = 2,
spat_enr_names = NULL,
select_cell_groups = NULL,
select_cells = NULL,
show_other_cells = T,
other_cell_color = "lightgrey",
other_point_size = 0.5,
show_NN_network = F,
nn_network_to_use = "sNN",
network_name = "sNN.pca",
color_as_factor = T,
cell_color = NULL,
cell_color_code = NULL,
show_cluster_center = F,
show_center_label = T,
center_point_size = 4,
label_size = 4,
edge_alpha = NULL,
point_size = 5
)
plotly object
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.