extractNearestNetwork: extractNearestNetwork
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
extractNearestNetwork R Documentation
extractNearestNetwork
Description
Function to calculate gene signature enrichment scores per spatial position using a rank based approach.
Usage
extractNearestNetwork(...)
Arguments
...
Arguments passed on to select_NearestNetwork
gobjectgiotto object
nn_network_to_usekNN or sNN
network_namename of NN network to be used
outputreturn a igraph or data.table object
See Also
select_NearestNetwork
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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| extractNearestNetwork | R Documentation |
extractNearestNetwork
Description
Function to calculate gene signature enrichment scores per spatial position using a rank based approach.
Usage
extractNearestNetwork(...)
Arguments
... |
Arguments passed on to
|
See Also
select_NearestNetwork
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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