kmeans_binarize_wrapper: kmeans_binarize_wrapper

In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox

kmeans_binarize_wrapper

Description

wrapper for different binarization functions

Usage

kmeans_binarize_wrapper(
  gobject,
  expression_values = c("normalized", "scaled", "custom"),
  subset_genes = NULL,
  kmeans_algo = c("kmeans", "kmeans_arma", "kmeans_arma_subset"),
  nstart = 3,
  iter_max = 10,
  extreme_nr = 50,
  sample_nr = 50,
  set.seed = NULL
)

RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.