pca_giotto: pca_giotto
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
View source: R/dimension_reduction.R
pca_giotto R Documentation
pca_giotto
Description
performs PCA based on Rfast
Usage
pca_giotto(mymatrix, center = T, scale = T, k = 50)
Arguments
mymatrix
matrix or object that can be converted to matrix
center
center data
scale
scale features
k
number of principal components to calculate
Value
list of eigenvalues, eigenvectors and pca coordinates
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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View source: R/dimension_reduction.R
| pca_giotto | R Documentation |
pca_giotto
Description
performs PCA based on Rfast
Usage
pca_giotto(mymatrix, center = T, scale = T, k = 50)
Arguments
mymatrix |
matrix or object that can be converted to matrix |
center |
center data |
scale |
scale features |
k |
number of principal components to calculate |
Value
list of eigenvalues, eigenvectors and pca coordinates
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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