plot_network_layer_ggplot: plot_network_layer_ggplot
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
View source: R/spatial_visuals.R
plot_network_layer_ggplot R Documentation
plot_network_layer_ggplot
Description
Visualize cells in network layer according to dimension reduction coordinates
Usage
plot_network_layer_ggplot(
ggobject,
annotated_network_DT,
edge_alpha = NULL,
show_legend = T
)
Arguments
annotated_network_DT
annotated network data.table of selected cells
edge_alpha
alpha of network edges
show_legend
show legend
gobject
giotto object
Details
Description of parameters.
Value
ggplot
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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View source: R/spatial_visuals.R
| plot_network_layer_ggplot | R Documentation |
plot_network_layer_ggplot
Description
Visualize cells in network layer according to dimension reduction coordinates
Usage
plot_network_layer_ggplot(
ggobject,
annotated_network_DT,
edge_alpha = NULL,
show_legend = T
)
Arguments
annotated_network_DT |
annotated network data.table of selected cells |
edge_alpha |
alpha of network edges |
show_legend |
show legend |
gobject |
giotto object |
Details
Description of parameters.
Value
ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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