plot_spat_scatterpie_layer_ggplot: plot_spat_scatterpie_layer_ggplot

In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox

plot_spat_scatterpie_layer_ggplot

Description

create scatterpie in ggplot

Usage

plot_spat_scatterpie_layer_ggplot(
  ggobject,
  sdimx = "sdimx",
  sdimy = "sdimy",
  spatial_locations = NULL,
  spatial_enrichment = NULL,
  radius = 10,
  color = NA,
  alpha = 1,
  cell_color_code = NULL
)

Arguments

sdimx	x-axis dimension name (default = 'sdimx')
sdimy	y-axis dimension name (default = 'sdimy')
spatial_locations	spatial locations
spatial_enrichment	spatial enrichment results
radius	radius of scatterpie
color	color of lines within pie chart
cell_color_code	color code for the cell types
gobject	giotto object

Value

ggplot

RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.