removeGeneAnnotation: removeGeneAnnotation

In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox

removeGeneAnnotation

Description

removes gene annotation of giotto object

Usage

removeGeneAnnotation(gobject, columns = NULL, return_gobject = TRUE)

Arguments

gobject	giotto object
columns	names of columns to remove
return_gobject	boolean: return giotto object (default = TRUE)

Details

if return_gobject = FALSE, it will return the gene metadata

Value

giotto object

Examples

data(mini_giotto_single_cell) # load full mini giotto object

# show gene metadata
fDataDT(mini_giotto_single_cell)

# remove nr_cells column
mini_giotto_single_cell = removeGeneAnnotation(mini_giotto_single_cell,
                                               columns = 'nr_cells')

RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.