analyzeEdgeQuant: Performs linear regression of a quantitative traits against a...

In SystemsGenetics/KINC.R: Provides additional functions for network files created using KINC.

Description

Performs linear regression of a quantitative traits against a single edge in the network.

Usage

analyzeEdgeQuant(i, osa, net, field, samples = c())

Arguments

i	The index of the edge in the network
osa	The sample annotation matrix. One column must contain the header 'Sample' and the remaining colums correspond to an annotation type. The rows of the anntation columns should contain the annotations.
net	A network dataframe containing the KINC-produced network. The loadNetwork function imports a dataframe in the correct format for this function.
field	The field in the osa variable on which enrichment will be performed.
samples	Limit the analysis to only the samples indexes provided.

SystemsGenetics/KINC.R documentation built on Nov. 10, 2021, 9:22 p.m.