text_summary: Create a human-readable text summary of palmID

In ababaian/palmid: Viral RNA Dependent RNA Polymerase Analysis Suite

Create a human-readable text summary of palmID

Description

Create a human-readable text summary of palmID

Usage

text_summary(pp.in, pro.df, palm.sra, palmdb.hits)

Arguments

pp.in	data.frame, palmprint from read.fev()
pro.df	data.frame, DIAMOND alignment to palmDB from read.pro()
palm.sra	data.frame, palm-sra object from get.palmSra()
palmdb.hits	numeric, original value for all-palmDB hits

Value

A character-string summary to use with cat()

ababaian/palmid documentation built on July 1, 2023, 1:09 a.m.