get_PRROC: get_PRROC

Description Usage Arguments Value Author(s)

View source: R/get_PRROC.R

Description

Returns precision and recall values for a data frame containing TP and a score metric (e.g. Bayes factor), or the AUPrRc.

Usage

1
get_PRROC(data, score_col, group_col = NULL)

Arguments

data

A data frame containing a 'TP' logical column indicating which genes are true positives.

score_col

A character string naming a column containing a score metric.

group_col

A character string naming the grouping column of 'data'. If 'NULL' then no group, defaults to 'NULL'.

Value

A data frame containing the following columns: 'Precision', 'Recall', 'Sensitivity_FDR_10pct', 'Sensitivity_FDR_10pct', and 'AUPrRc'.

Author(s)

Alex T. Kalinka, alex.kalinka@cancer.org.uk


alex-kalinka-cruk/fgcQC documentation built on June 23, 2020, 9:05 p.m.