mock_bcl2fastq_json: mock_bcl2fastq_json
In alex-kalinka-cruk/fgcQC: QC metric calculations for CRISPR screen data produced at the FGC
Description
Usage
Arguments
Value
View source: R/mock_bcl2fastq_json.R
Description
Mock bcl2fastq data for a specified number of samples with given sample IDs (to match an analysis config), write to a temporary file, and return the temporary file path.
Usage
1
mock_bcl2fastq_json(sample_ids, sample_names)
Arguments
sample_ids
A character vector naming the sample IDs (indexes) to be mocked.
sample_names
A character vector of sample names extracted from the analysis config comparisons.
Value
A file path to a temporary mock 'bcl2fastq' JSON file.
alex-kalinka-cruk/fgcQC documentation built on June 23, 2020, 9:05 p.m.
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Description Usage Arguments Value
View source: R/mock_bcl2fastq_json.R
Description
Mock bcl2fastq data for a specified number of samples with given sample IDs (to match an analysis config), write to a temporary file, and return the temporary file path.
Usage
1 | mock_bcl2fastq_json(sample_ids, sample_names)
|
Arguments
sample_ids |
A character vector naming the sample IDs (indexes) to be mocked. |
sample_names |
A character vector of sample names extracted from the analysis config comparisons. |
Value
A file path to a temporary mock 'bcl2fastq' JSON file.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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