guess.parents: Attempt to guess the mother-father pair corresponding to...
In andrewparkermorgan/argyle: Basic interface and QC for genotypes from Illumina Infinium arrays
Description
Usage
Arguments
Details
Value
Description
Attempt to guess the mother-father pair corresponding to offspring
Usage
1
guess.parents(gty, parents, ...)
Arguments
gty
a genotypes object containing target individuals
parents
a genotypes object containing possible parents for the target individuals
...
ignored
Details
This wrapper calls mendel.distance() for all mother-father pairs available from
parents and all offspring in gty, and for each offspring reports the mother-father
pair with the smallest Mendel distance. No guarantees are made with respect to near-misses.
Value
the sample metedata from the input object, with mom and dad values replaced
by the function's best guesses
andrewparkermorgan/argyle documentation built on May 10, 2019, 11:08 a.m.
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Description Usage Arguments Details Value
Description
Attempt to guess the mother-father pair corresponding to offspring
Usage
1 | guess.parents(gty, parents, ...)
|
Arguments
gty |
a |
parents |
a |
... |
ignored |
Details
This wrapper calls mendel.distance() for all mother-father pairs available from
parents and all offspring in gty, and for each offspring reports the mother-father
pair with the smallest Mendel distance. No guarantees are made with respect to near-misses.
Value
the sample metedata from the input object, with mom and dad values replaced
by the function's best guesses
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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