c_count: count overlaps
In arendsee/synder: Use Synteny to Filter Genomic Search
Description
count overlaps
Usage
1
c_count(syn, gff, swap, offsets)
Arguments
syn
synteny map file name
gff
GFF file name
swap
reverse direction of synteny map (e.g. swap query and target)
offsets
4-element integer vector of [01] offsets (start/stop
offsets for the synteny maps and the GFF)
arendsee/synder documentation built on May 10, 2019, 1:26 p.m.
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Description
count overlaps
Usage
1 | c_count(syn, gff, swap, offsets)
|
Arguments
syn |
synteny map file name |
gff |
GFF file name |
swap |
reverse direction of synteny map (e.g. swap query and target) |
offsets |
4-element integer vector of [01] offsets (start/stop offsets for the synteny maps and the GFF) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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