make_tblastn_gene_map: make gene map
In arendsee/synder: Use Synteny to Filter Genomic Search
Description
Usage
Arguments
Value
Description
make gene map
Usage
1
2
make_tblastn_gene_map(tblastn_file, tgff, fmap = NULL,
fromAttr = identity)
Arguments
tblastn_file
filename for tblastn results
tgff
GFF file or object
fmap
an optional map from target protein to gene name (fseqid)
fromAttr
function mapping 'attr' column to gene name
Value
data.frame
arendsee/synder documentation built on May 10, 2019, 1:26 p.m.
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Description Usage Arguments Value
Description
make gene map
Usage
1 2 | make_tblastn_gene_map(tblastn_file, tgff, fmap = NULL,
fromAttr = identity)
|
Arguments
tblastn_file |
filename for tblastn results |
tgff |
GFF file or object |
fmap |
an optional map from target protein to gene name (fseqid) |
fromAttr |
function mapping 'attr' column to gene name |
Value
data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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