getBin: Get the name of the input region from bed file in the format...
In bowang-lab/simATAC: This package is a single-cell ATAC-seq simulator
Description
Usage
Arguments
Value
View source: R/ExtraFunctions.R
Description
Get the name of the input region from bed file in the format of chr:start-end as a string. Start
and end are coordinates of the beginning and end of a specific bin with 5000 length base pairs.
Usage
1
getBin(region, bin.name)
Arguments
region
Input region in the format of [chr, start, end].
bin.name
List of bin names of the raw bin by cell matrix.
Value
List of bin names that has intersection with the input region.
bowang-lab/simATAC documentation built on Jan. 28, 2021, 1:22 a.m.
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Description Usage Arguments Value
View source: R/ExtraFunctions.R
Description
Get the name of the input region from bed file in the format of chr:start-end as a string. Start and end are coordinates of the beginning and end of a specific bin with 5000 length base pairs.
Usage
1 | getBin(region, bin.name)
|
Arguments
region |
Input region in the format of [chr, start, end]. |
bin.name |
List of bin names of the raw bin by cell matrix. |
Value
List of bin names that has intersection with the input region.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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