simATACEstNonZeroPro: Estimate bins' non-zero cell proportion
In bowang-lab/simATAC: This package is a single-cell ATAC-seq simulator

Extract the non-zero cell proportion of each bin among all single cells from the input count matrix.

1	simATACEstNonZeroPro(count, object)

`count`	A sparse count matrix to estimate parameters from.
`object`	simATACCount object to store estimated parameters.

Vector of non-zero cell proportions of bins is calculated by dividing the number of non-zero entries over the number of all cells for each bin.

simATACCount object with updated non-zero cell proportion parameter.

bowang-lab/simATAC documentation built on Jan. 28, 2021, 1:22 a.m.

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