simATACEstLibSize: Estimate library size parameters
In bowang-lab/simATAC: This package is a single-cell ATAC-seq simulator
Description
Usage
Arguments
Value
View source: R/simATACEstimate.R
Description
A Gaussian mixture distribution is fitted to the log2 transformation of
library size values. The estimated parameters are added to the input object
variable. See normalmixEM for details on the fitting.
Usage
1
simATACEstLibSize(count, object)
Arguments
count
A sparse count matrix to estimate parameters from.
object
simATACCount object to store estimated parameters.
Value
simATACCount object with updated library size parameter.
bowang-lab/simATAC documentation built on Jan. 28, 2021, 1:22 a.m.
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Description Usage Arguments Value
View source: R/simATACEstimate.R
Description
A Gaussian mixture distribution is fitted to the log2 transformation of
library size values. The estimated parameters are added to the input object
variable. See normalmixEM for details on the fitting.
Usage
1 | simATACEstLibSize(count, object)
|
Arguments
count |
A sparse count matrix to estimate parameters from. |
object |
simATACCount object to store estimated parameters. |
Value
simATACCount object with updated library size parameter.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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