chooseIndex: Identifies which of a set of remaining peptides from a blast...
In brandonsie/epitopefindr: Minimal Overlaps from BLAST Alignments
Description
Usage
Arguments
Value
Description
Identifies which of a set of remaining peptides from a blast
alignment table should serve as the next index peptide.
Usage
1
chooseIndex(input, method = "min")
Arguments
input
Data frame with BLAST alignments.
method
Either "min" or "max": instructs whether chooseIndex should
suggest the peptide with the fewest or most alignments, respectively.
Value
Peptide name.
brandonsie/epitopefindr documentation built on Oct. 31, 2021, 5:20 p.m.
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Description Usage Arguments Value
Description
Identifies which of a set of remaining peptides from a blast alignment table should serve as the next index peptide.
Usage
1 | chooseIndex(input, method = "min")
|
Arguments
input |
Data frame with BLAST alignments. |
method |
Either "min" or "max": instructs whether chooseIndex should suggest the peptide with the fewest or most alignments, respectively. |
Value
Peptide name.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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