epitopeBLAST: Identifies next index peptide, calls indexEpitopes to parse...
In brandonsie/epitopefindr: Minimal Overlaps from BLAST Alignments
epitopeBLAST R Documentation
Identifies next index peptide, calls indexEpitopes to parse alignments to
that index peptide, and updates BLAST table accordingly.
Description
Identifies next index peptide, calls indexEpitopes to parse alignments to
that index peptide, and updates BLAST table accordingly.
Usage
epitopeBLAST(data, aln.size)
Arguments
data
List with BLAST alignment table and fasta file of peptides.
aln.size
Minimum length of alignment to consider from BLASTp alignments of 'data'.
brandonsie/epitopefindr documentation built on May 4, 2024, 10:27 a.m.
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| epitopeBLAST | R Documentation |
Identifies next index peptide, calls indexEpitopes to parse alignments to that index peptide, and updates BLAST table accordingly.
Description
Identifies next index peptide, calls indexEpitopes to parse alignments to that index peptide, and updates BLAST table accordingly.
Usage
epitopeBLAST(data, aln.size)
Arguments
data |
List with BLAST alignment table and fasta file of peptides. |
aln.size |
Minimum length of alignment to consider from BLASTp alignments of 'data'. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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