brucemoran/RNAseqR: RNAseq DE Analysis Downstream from Nextflow Pipelines

Move from standardised output from Nextflow pipelines (nf-core-rnaseq, brucemoran-RNAseq-kallisto) to DE analysis using bare-bones input; 'DESeq2', 'edgeR' and 'limma' DE callers, with overlaps considered and 'fgsea' for pathway analysis.

Vignettes Man pages API and functions Files

Package details
Maintainer
License	`use_mit_license()`
Version	0.0.2
Package repository	View on GitHub
Installation	Install the latest version of this package by entering the following in R: `install.packages("remotes") remotes::install_github("brucemoran/RNAseqR")`