API for brucemoran/RNAseqR
RNAseq DE Analysis Downstream from Nextflow Pipelines
| Global functions | |
|---|---|
| BMplotPCA | Man page Source code |
| DESeq2_module | Man page Source code |
| biomaRt_anno_orth | Man page Source code |
| brucemoran_rnaseq_kallisto_parser | Man page Source code |
| dupradar_run | Man page Source code |
| edgeR_module | Man page Source code |
| fgsea_plot | Man page Source code Source code |
| fgsea_ssgsea_msviper | Man page Source code |
| found_in_three | Man page Source code |
| found_in_two | Man page Source code |
| genesGTF | Man page Source code |
| get_metadata | Man page Source code |
| get_tx2gene | Man page Source code |
| group_agg_multi | Man page Source code |
| group_agg_two | Man page Source code |
| highest_exp_wides | Man page Source code |
| limma_module | Man page Source code |
| make_aracne_inputs | Man page Source code |
| master_parse_join | Man page Source code |
| msigdb_pathways_to_list | Man page Source code |
| nf_core_rnaseq_featco_parser | Man page Source code |
| nf_core_rnaseq_star_salmon_parser | Man page Source code |
| obs_raw_widen | Man page Source code |
| parse_aracne | Man page Source code |
| per_contrast_fgsea_de | Man page Source code |
| run_msviper | Man page Source code |
| run_prep_modules_bm | Man page Source code |
| so_obs_raw_out | Man page Source code |
| so_to_raw_counts | Man page |
| ssgsea_pca | Man page Source code |
| ssgsea_rotationPCA | Man page Source code |
| stringTie_res_join | Man page |
| venn_3 | Man page Source code |
