viperGetTFScores: Function to normalize TF scores
In califano-lab/MOMA: Multi Omic Master Regulator Analysis
Description
Usage
Arguments
Value
View source: R/make.interactions.r
Description
Function to normalize TF scores
Usage
1
viperGetTFScores(vipermat, fdr.thresh = 0.05)
Arguments
vipermat
- matrix of VIPER scores with columns as samples,
rows as protein names
fdr.thresh
- BH-FDR threshold (default 0.05 FDR rate)
Value
A vector of normalized z-scores, named by TF id
califano-lab/MOMA documentation built on June 7, 2020, 7:17 a.m.
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Description Usage Arguments Value
View source: R/make.interactions.r
Description
Function to normalize TF scores
Usage
1 | viperGetTFScores(vipermat, fdr.thresh = 0.05)
|
Arguments
vipermat |
- matrix of VIPER scores with columns as samples, rows as protein names |
fdr.thresh |
- BH-FDR threshold (default 0.05 FDR rate) |
Value
A vector of normalized z-scores, named by TF id
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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