API for carter-allen/IRISFGM
Comprehensive Analysis of Gene Interactivity Networks Based on Single-Cell RNA-Seq
| Global functions | |
|---|---|
| .CalBinaryMultiSignal | Man page Source code |
| .CalBinarySingleSignal | Man page Source code |
| .GetBinaryMultiSignal | Man page Source code |
| .GetBinarySingleSignal | Man page Source code |
| .GetLTMGmatrix | Man page Source code |
| .IDConvert | Man page Source code |
| .RunGO | Man page Source code |
| .RunKEGG | Man page Source code |
| .RunLTMG | Man page Source code |
| .addMeta | Man page Source code |
| .dotPlotPathway | Man page Source code |
| .final | Man page Source code |
| .findMarker | Man page Source code |
| .findglobalMarkers | Man page Source code |
| .generateNetObject | Man page Source code |
| .getBlock | Man page Source code |
| .main | Source code |
| .onUnload | Source code |
| .plotDimension | Man page Source code |
| .plotHeatmap | Man page Source code |
| .plotMeta | Man page Source code |
| .plotmodulenetwork | Man page Source code |
| .plotnetwork | Man page Source code |
| .processData | Man page Source code |
| .runBicluster | Man page Source code |
| .runBiclusterBaseOnDiscretization | Man page Source code |
| .runBiclusterBaseOnLTMG | Man page Source code |
| .runClassification | Man page Source code |
| .runDimensionReduction | Man page Source code |
| .runDiscretization | Man page Source code |
| .runPathway | Man page Source code |
| .separateBic | Man page Source code |
| .subset_data | Man page Source code |
| AddMeta | Man page |
| AddMeta,IRISFGM-method | Man page |
| BIC_LTMG | Man page Source code |
| BIC_ZIMG | Man page Source code |
| CLUSTERING | Man page Source code |
| CalBinaryMultiSignal | Man page |
| CalBinaryMultiSignal,IRISFGM-method | Man page |
| CalBinarySingleSignal | Man page |
| CalBinarySingleSignal,IRISFGM-method | Man page |
| CreateIRISFGMObject | Man page Source code |
| DimReduce-class | Man page |
| DotPlotPathway | Man page |
| DotPlotPathway,IRISFGM-method | Man page |
| FindClassBasedOnMC | Man page |
| FindClassBasedOnMC,IRISFGM-method | Man page |
| FindGlobalMarkers | Man page |
| FindGlobalMarkers,IRISFGM-method | Man page |
| FindMarker | Man page |
| FindMarker,IRISFGM-method | Man page |
| Fit_LTMG | Man page Source code |
| GRAPH | Man page Source code |
| GetBinaryMultiSignal | Man page |
| GetBinaryMultiSignal,IRISFGM-method | Man page |
| GetBinarySingleSignal | Man page |
| GetBinarySingleSignal,IRISFGM-method | Man page |
| GetLTMGmatrix | Man page |
| GetLTMGmatrix,IRISFGM-method | Man page |
| Global_Zcut | Man page Source code |
| IRISFGM-class | Man page |
| InverseMillsRatio | Man page Source code |
| KS_LTMG | Man page Source code |
| KS_ZIMG | Man page Source code |
| LTMG | Man page Source code |
| LogSeparateKRpkmNew | Man page Source code |
| LogSeparateKRpkmNewLR | Man page Source code |
| MCL | Man page Source code |
| MINUS | Man page Source code |
| MIN_return | Man page Source code |
| Pi_Zj_Zcut_new | Man page Source code |
| PlotDimension | Man page |
| PlotDimension,IRISFGM-method | Man page |
| PlotHeatmap | Man page |
| PlotHeatmap,IRISFGM-method | Man page |
| PlotMarkerHeatmap | Man page Source code |
| PlotMeta | Man page |
| PlotMeta,IRISFGM-method | Man page |
| PlotModuleNetwork | Man page |
| PlotModuleNetwork,IRISFGM-method | Man page |
| PlotNetwork | Man page |
| PlotNetwork,IRISFGM-method | Man page |
| ProcessData | Man page |
| ProcessData,IRISFGM-method | Man page |
| Pure_CDF | Man page Source code |
| ReadFrom10X_folder | Man page Source code |
| ReadFrom10X_folder,IRISFGM-method | Man page |
| ReadFrom10X_h5 | Man page Source code |
| ReadFrom10X_h5,IRISFGM-method | Man page |
| RunBicluster | Man page |
| RunBicluster,IRISFGM-method | Man page |
| RunClassification | Man page |
| RunClassification,IRISFGM-method | Man page |
| RunDimensionReduction | Man page |
| RunDimensionReduction,IRISFGM-method | Man page |
| RunDiscretization | Man page |
| RunDiscretization,IRISFGM-method | Man page |
| RunLTMG | Man page |
| RunLTMG,IRISFGM-method | Man page |
| RunPathway | Man page |
| RunPathway,IRISFGM-method | Man page |
| SC | Man page Source code |
| SeparateKRpkmNew | Man page Source code |
| SeparateKRpkmNew2 | Man page Source code |
| SeparateKRpkmNewLR | Man page Source code |
| SeparateKRpkmNewLRPlus | Man page Source code |
| SeparateKRpkmNewp | Man page Source code |
| State_return | Man page Source code |
| SubsetData | Man page |
| SubsetData,IRISFGM-method | Man page |
| qubic | Man page Source code |
